Protein ZmABI3
ZmABI3 is a protein in the ABI3-VP1 family.
Information
TF Name: ZmABI3
Species: Maize
TF Family: ABI3-VP1
Gene Name(Synonym): ABI3
Uniprot ID: B4G1A0
Subgenome: 1

Protein ZmABI3

ZmABI3 is a protein in the ABI3-VP1 family.

Overview of domains present in v5 transcripts
PF02362
Zm00001eb066270_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d001838DAPseq no logo sequence fimo position
Zm00001d001838DAPseq no logo sequence fimo position
Zm00001d001838ChIPseq no logo sequence fimo position
Zm00001d001838PChIPseq no logo sequence fimo position

Interactions where ZmABI3 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmABI3 is the target  
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There are 34 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb066270_T004 from maize genome v5

Amino Acid Sequence
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MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGEFVKRHGLQAKDILIIYRNKKSGRYVA
RAVKAEDIAPPECECVEAGNPREECGFSVSPSINKKIIT

MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGEFVKRHGLQAKDILIIYRNKKSGRYVA
RAVKAEDIAPPECECVEAGNPREECGFSVSPSINKKIIT

MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGEFVKRHGLQAKDILIIYRNKKSGRYVA
RAVKAEDIAPPECECVEAGNPREECGFSVSPSINKKIIT

MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGEFVKRHGLQAKDILIIYRNKKSGRYVA
RAVKAEDIAPPECECVEAGNPREECGFSVSPSINKKIIT

MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGEFVKRHGLQAKDILIIYRNKKSGRYVA
RAVKAEDIAPPECECVEAGNPREECGFSVSPSINKKIIT

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02362
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Nucleotide Sequence
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AAAATTCCCCAAAGGCCGAAATAAA...

GRMZM2G149940_T01 from maize genome v3


Related TFome: pUT3236

Amino Acid Sequence
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MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGEFVKRHGLQAKDILIIYRNKKSGRYVA
RAVKAEDIAPPECECVEAGNPREECGFSVSPSINKKIIT

Nucleotide Sequence
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TCTTCAAGGGCACAGCCGCGGCCAC...

GRMZM2G149940_T02 from maize genome v3

Amino Acid Sequence
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MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEMSSYGVMILQDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTN
SDVGNIGRIVLPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGEFVKRHGLQAKDILIIY
RNKKSGRYVARAVKAEDIAPPECECVEAGNPREECGFSVSPSINKKIIT

Nucleotide Sequence
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TCTTCAAGGGCACAGCCGCGGCCAC...

Zm00001d001838_T001 from maize genome v4

Amino Acid Sequence
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MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGEFVKRHGLQAKDILIIYRNKKSGRYVA
RAVKAEDIAPPECECVEAGNPREECGFSVSPSINKKIIT

Nucleotide Sequence
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TCTTCAAGGGCACAGCCGCGGCCAC...

Zm00001eb066270_T001 from maize genome v5

Amino Acid Sequence
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MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKMQSLTFQSWKIRMA

Nucleotide Sequence
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AAAATTCCCCAAAGGCCGAAATAAA...

Zm00001eb066270_T002 from maize genome v5

Amino Acid Sequence
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MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKKDAEPNLPILEDKDGLILEMDDFELPVVWNFKYRYWPNNKSRMYILESTGTRNLADMLPVR

Nucleotide Sequence
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AAAATTCCCCAAAGGCCGAAATAAA...

Zm00001eb066270_T003 from maize genome v5

Amino Acid Sequence
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MANANGSSTGAGHSDLVRAISHEQHQAFMASVPRAAPGGVNVHHQQHFHQYPAGLIPAPVALPVHAPVSSQTSPYSAQIA
VPPPPPPLIASPDHRLHSLPPTGCYQLDYSPYGNAAAPSQQHTSAIRGFADWGTHSNALMSLAHATSFGNNGSSNINNNG
LLHQNLSPYTTHTWTTTYVQRPYNTAVYAPATMNMLQTPPFHSNSHEKESGAVFSNSFNMAPSVTPTSPFQLMSPSSTNY
TSTQIFEETNNLEDTSRVFGGGDNESNNSEEPDPKPAVEMEDLNQGNDHTSNKTANCQDYRMVLRKDLTNSDVGNIGRIV
LPKMQSLTFQSWKIRMA

Nucleotide Sequence
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AAAATTCCCCAAAGGCCGAAATAAA...


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